| Protein ZmBBR2 | |
|---|---|
|
ZmBBR2 is a protein in the BBR/BPC family.
|
|
| Information | |
| TF Name: | ZmBBR2 |
| Species: | Maize |
| TF Family: | BBR/BPC |
| Gene Name(Synonym): | BBR2 |
| Uniprot ID: | B7ZY75 |
Protein ZmBBR2
ZmBBR2 is a protein in the BBR/BPC family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF06217 | |
| Zm00001eb094740_T003 |  |
| Zm00001eb094740_T001 | |
| Zm00001eb094740_T002 | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d005160 | DAPseq |  |
sequence | fimo | position |
| Zm00001d005160 | DAPseq |  |
sequence | fimo | position |
| Zm00001d005160 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d005160 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmBBR2 is the regulator
Interactions where ZmBBR2 is the target
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Zm00001eb094740_T003 from maize genome v5
Amino Acid Sequence
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MDITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMV
INGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGY
NLANPIDLKTFWAKHGTNKFVTIR
MDITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMV
INGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGY
NLANPIDLKTFWAKHGTNKFVTIR
MDITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMV
INGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGY
NLANPIDLKTFWAKHGTNKFVTIR
MDITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMV
INGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGY
NLANPIDLKTFWAKHGTNKFVTIR
MDITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMV
INGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGY
NLANPIDLKTFWAKHGTNKFVTIR
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF06217 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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GCCTGCCCGACGCACGCCGGCACGC...
GCCTGCCCGACGCACGCCGGCACGCCGAGCCGGTAGCAGAGGATCCCCGTTCGCCTCCCTACAACCTGACCCCCCCACGGCCCCACCCCCCTCCGTCGGCGACAGGGCGAGCGCCGCCGCCCTTGTCTTCGCCGGCGACGAGCATCGCCAGGGGACTACCGATTGCAGGGCGGTTGCGGAGATGGGGGCTGATCAGAAACCACGACAAGCCTTGCCATTCGGAACTGGGGCTTCTACGACACCGTCAAAGGCAGCCTAGGCCTGCAGCTCATGTCGTCCATGCCGCCTGACCGGGACACAAAGCCGCTGCTCCCGAGAGGTGCCTTGCTGCAGCAGCATGGACATCACAATGCCGCACACCAGCTCCACGCGCAGCAATCACAACATCATCGTGACTATGCTGGCGGCACATCCTGACCCGGACACAAAGCCGCCTGTAAAGAAGAGGTGGCAGGTTCGGCAGCCTAAGTCACTGAAGCCTAGGAAGCCTAAGAAGGCTGCTGTTCCACCAGAGAATGGGGCACTTAATGAGCATGCGCCCCGAAGGAGGGGACCTAAGAAGACTGTGGGGATGGTGATTAATGGTATTGAGTTGGACCTTGCTAACATACCGACACCAGTGTGCTCATGCACCGGAGCTCCCCAGCAATGCTACCGATGGGGCGCAGGTGGCTGGCAGTCTGCATGCTGCACAACTTCTATTTCAACGTATCCACTGCCAATGAGCACAAAGCGCCGGGGCGCTCGAATTGCTGGAAGGAAGATGAGCCAAGGTGCATTCAAAAAGGTGCTTGAGAAGCTTGCTGGCGAAGGGTACAACCTTGCTAATCCAATTGACTTGAAGACGTTTTGGGCTAAGCATGGCACAAATAAGTTTGTAACGATCAGGTAAAATGACATAGTATGTTTCTAGCTTTGTAGGTTGTAGAGCTGCAGTTAGGCCCGATTTATTGCTTTTATGTCTATGTAAGAATCTGCAGAAATTTGTAGTAGTAGTAGTAGCAGCAGCATGTAGCAATGTTTAGTTTTAAATGACTTAGTTGTAATGTCTATCTTGAGCTTCAGATATTGACCCGACTGAAGCCTGTTTGTATCCTTCACTTTGCAAATTGTAGTTTACCCTGTACCCATAATTGTCTCTAATTTAGGGCATGGAATTTAATGCATTAATTAAATCTGTGTGGAAGTAAGCACT
GRMZM2G166230_T01 from maize genome v3
Amino Acid Sequence
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MDITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMV
INGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGY
NLANPIDLKTFWAKHGTNKFVTIR
Nucleotide Sequence
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CTGGGCCGTGGTTGTGACCACCTAT...
CTGGGCCGTGGTTGTGACCACCTATACCCGACAGAGCGAGGTGTGCACTGCGTTTGGCGGGGCCTGCCCGACGCACGCCGGCACGCCGAGCCGGTAGCAGAGGATCCCCGTTCGCCTCCCTACAACCTGACCCCCCCACGGCCCCACCCCCCTCCGTCGGCGACAGGGCGAGCGCCGCCGCCCTTGTCTTCGCCGGCGACGAGCATCGCCAGGGGACTACCGATTGCAGGGCGGTTGCGGAGATGGGGGCTGATCAGAAACCACGACAAGCCTTGCCATTCGGAACTGGGGCTTCTACGACACCGTCAAAGGCAGCCTAGGCCTGCAGCTCATGTCGTCCATGCCGCCTGACCGGGACACAAAGCCGCTGCTCCCGAGAGGTGCCTTGCTGCAGCAGCATGGACATCACAATGCCGCACACCAGCTCCACGCGCAGCAATCACAACATCATCGTGACTATGCTGGCGGCACATCCTGACCCGGACACAAAGCCGCCTGTAAAGAAGAGGTGGCAGGTTCGGCAGCCTAAGTCACTGAAGCCTAGGAAGCCTAAGAAGGCTGCTGTTCCACCAGAGAATGGGGCACTTAATGAGCATGCGCCCCGAAGGAGGGGACCTAAGAAGACTGTGGGGATGGTGATTAATGGTATTGAGTTGGACCTTGCTAACATACCGACACCAGTGTGCTCATGCACCGGAGCTCCCCAGCAATGCTACCGATGGGGCGCAGGTGGCTGGCAGTCTGCATGCTGCACAACTTCTATTTCAACGTATCCACTGCCAATGAGCACAAAGCGCCGGGGCGCTCGAATTGCTGGAAGGAAGATGAGCCAAGGTGCATTCAAAAAGGTGCTTGAGAAGCTTGCTGGCGAAGGGTACAACCTTGCTAATCCAATTGACTTGAAGACGTTTTGGGCTAAGCATGGCACAAATAAGTTTGTAACGATCAGGTAAAATGACATAGTATGTTTCTAGCTTTGTAGGTTGTAGAGCTGCAGTTAGGCCCGATTTATTGCTTTTATGTCTATGTAAGAATCTGCAGAAATTTGTAGTAGTAGTAGTAGCAGCAGCATGTAGCAATGTTTAGTTTTAAATGACTTAGTTGTAATGTCTATCTTGAGCTTCAGATATTGACCCGACTGAAGCCTGTTTGTATCCTTCACTTTGCAAATTGTAGTTTACCCTGTACCCATAATTGTCTCTAATTTAGGGCATGGAATTTAATGCATTAATTAAATCTGTGTGGAAGTAAGCACT
GRMZM2G166230_T02 from maize genome v3
Amino Acid Sequence
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MDITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMV
INGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGY
NLANPIDLKTFWAKHGTNKFVTIR
Nucleotide Sequence
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CTGGGCCGTGGTTGTGACCACCTAT...
CTGGGCCGTGGTTGTGACCACCTATACCCGACAGAGCGAGGTGTGCACTGCGTTTGGCGGGGCCTGCCCGACGCACGCCGGCACGCCGAGCCGGTAGCAGAGGATCCCCGTTCGCCTCCCTACAACCTGACCCCCCCACGGCCCCACCCCCCTCCGTCGGCGACAGGGCGAGCGCCGCCGCCCTTGTCTTCGCCGGCGACGAGCATCGCCAGGGGACTACCGATTGCAGGGCGGTTGCGGAGATGGGGGCTGATCAGAAACCACGACAAGGTTCGGGTTTTCTCCTACAGATTGCGATCTCTAGAGGTGGATTTGCTTTTCCTCACATTCTGAGATGGAAGCCGATGATGGCAGCCTTGCCATTCGGAACTGGGGCTTCTACGACACCGTCAAAGGCAGCCTAGGCCTGCAGCTCATGTCGTCCATGCCGCCTGACCGGGACACAAAGCCGCTGCTCCCGAGAGGTGCCTTGCTGCAGCAGCATGGACATCACAATGCCGCACACCAGCTCCACGCGCAGCAATCACAACATCATCGTGACTATGCTGGCGGCACATCCTGACCCGGACACAAAGCCGCCTGTAAAGAAGAGGTGGCAGGTTCGGCAGCCTAAGTCACTGAAGCCTAGGAAGCCTAAGAAGGCTGCTGTTCCACCAGAGAATGGGGCACTTAATGAGCATGCGCCCCGAAGGAGGGGACCTAAGAAGACTGTGGGGATGGTGATTAATGGTATTGAGTTGGACCTTGCTAACATACCGACACCAGTGTGCTCATGCACCGGAGCTCCCCAGCAATGCTACCGATGGGGCGCAGGTGGCTGGCAGTCTGCATGCTGCACAACTTCTATTTCAACGTATCCACTGCCAATGAGCACAAAGCGCCGGGGCGCTCGAATTGCTGGAAGGAAGATGAGCCAAGGTGCATTCAAAAAGGTGCTTGAGAAGCTTGCTGGCGAAGGGTACAACCTTGCTAATCCAATTGACTTGAAGACGTTTTGGGCTAAGCATGGCACAAATAAGTTTGTAACGATCAGGTAAAATGACATAGTATGTTTCTAGCTTTGTAGGTTGTAGAGCTGCAGTTAGGCCCGATTTATTGCTTTTATGTCTATGTAAGAATCTGCAGAAATTTGTAGTAGTAGTAGTAGCAGCAGCATGTAGCAATGTTTAGTTTTAAATGACTTAGTTGTAATGTCTATCTTGAGCTTCAGATATTGACCCGACTGAAGCCTGTTTGTATCCTTCACTTTGCAAATTGTAGTTTACCCTGTACCCATAATTGTCTCTAATTTAGGGCATGGAATTTAATGCATTAATTAAATCT
Zm00001d005160_T001 from maize genome v4
Amino Acid Sequence
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MGADQKPRQADDGSLAIRNWGFYDTVKGSLGLQLMSSMPPDRDTKPLLPRGALLQQHGHHNAAHQLHAQQSQHHRDYAGG
TS
Nucleotide Sequence
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GGCGGGGCCTGCCCGACGCACGCCG...
GGCGGGGCCTGCCCGACGCACGCCGGCACGCCGAGCCGGTAGCAGAGGATCCCCGTTCGCCTCCCTACAACCTGACCCCCCCACGGCCCCACCCCCCTCCGTCGGCGACAGGGCGAGCGCCGCCGCCCTTGTCTTCGCCGGCGACGAGCATCGCCAGGGGACTACCGATTGCAGGGCGGTTGCGGAGATGGGGGCTGATCAGAAACCACGACAAGCCGATGATGGCAGCCTTGCCATTCGGAACTGGGGCTTCTACGACACCGTCAAAGGCAGCCTAGGCCTGCAGCTCATGTCGTCCATGCCGCCTGACCGGGACACAAAGCCGCTGCTCCCGAGAGGTGCCTTGCTGCAGCAGCATGGACATCACAATGCCGCACACCAGCTCCACGCGCAGCAATCACAACATCATCGTGACTATGCTGGCGGCACATCCTGA
Zm00001eb094740_T001 from maize genome v5
Amino Acid Sequence
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MDITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMV
INGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGY
NLANPIDLKTFWAKHGTNKFVTIR
Nucleotide Sequence
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CGGGGCCTGCCCGACGCACGCCGGC...
CGGGGCCTGCCCGACGCACGCCGGCACGCCGAGCCGGTAGCAGAGGATCCCCGTTCGCCTCCCTACAACCTGACCCCCCCACGGCCCCACCCCCCTCCGTCGGCGACAGGGCGAGCGCCGCCGCCCTTGTCTTCGCCGGCGACGAGCATCGCCAGGGTTTGGTTACAGTGCCTGGAATTTGCATCTTTGCTTCTGCTTCTGCCGGAACCTCAATGCTCTATCTGATGGGCAGAATGGGTGTGCAGGGGACTACCGATTGCAGGGCGGTTGCGGAGATGGGGGCTGATCAGAAACCACGACAAGGTTCGGGTTTTCTCCTACAGATTGCGATCTCTAGAGGTGGATTTGCTTTTCCTCACATTCTGAGATGGAAGCCGATGATGGCAGCCTTGCCATTCGGAACTGGGGCTTCTACGACACCGTCAAAGGCAGCCTAGGCCTGCAGCTCATGTCGTCCATGCCGCCTGACCGGGACACAAAGCCGCTGCTCCCGAGAGGTGCCTTGCTGCAGCAGCATGGACATCACAATGCCGCACACCAGCTCCACGCGCAGCAATCACAACATCATCGTGACTATGCTGGCGGCACATCCTGACCCGGACACAAAGCCGCCTGTAAAGAAGAGGTGGCAGGTTCGGCAGCCTAAGTCACTGAAGCCTAGGAAGCCTAAGAAGGCTGCTGTTCCACCAGAGAATGGGGCACTTAATGAGCATGCGCCCCGAAGGAGGGGACCTAAGAAGACTGTGGGGATGGTGATTAATGGTATTGAGTTGGACCTTGCTAACATACCGACACCAGTGTGCTCATGCACCGGAGCTCCCCAGCAATGCTACCGATGGGGCGCAGGTGGCTGGCAGTCTGCATGCTGCACAACTTCTATTTCAACGTATCCACTGCCAATGAGCACAAAGCGCCGGGGCGCTCGAATTGCTGGAAGGAAGATGAGCCAAGGTGCATTCAAAAAGGTGCTTGAGAAGCTTGCTGGCGAAGGGTACAACCTTGCTAATCCAATTGACTTGAAGACGTTTTGGGCTAAGCATGGCACAAATAAGTTTGTAACGATCAGGTAAAATGACATAGTATGTTTCTAGCTTTGTAGGTTGTAGAGCTGCAGTTAGGCCCGATTTATTGCTTTTATGTCTATGTAAGAATCTGCAGAAATTTGTAGTAGTAGTAGTAGCAGCAGCATGTAGCAATGTTTAGTTTTAAATGACTTAGTTGTAATGTCTATCTTGAGCTTCAGATATTGACCCGACTGAAGCCTGTTTGTATCCTTCACTTTGCAAATTGTAGTTTACCCTGTACCCATAATTGTCTCTAATTTAGGGCATGGAATTTAATGCATTAATTAAATCTGTGTGGAAGTAAGCACT
Zm00001eb094740_T002 from maize genome v5
Amino Acid Sequence
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MDITMPHTSSTRSNHNIIVTMLAAHPDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMV
INGIELDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAGEGY
NLANPIDLKTFWAKHGTNKFVTIR
Nucleotide Sequence
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CGGGGCCTGCCCGACGCACGCCGGC...
CGGGGCCTGCCCGACGCACGCCGGCACGCCGAGCCGGTAGCAGAGGATCCCCGTTCGCCTCCCTACAACCTGACCCCCCCACGGCCCCACCCCCCTCCGTCGGCGACAGGGCGAGCGCCGCCGCCCTTGTCTTCGCCGGCGACGAGCATCGCCAGGGGACTACCGATTGCAGGGCGGTTGCGGAGATGGGGGCTGATCAGAAACCACGACAAGGTTCGGGTTTTCTCCTACAGATTGCGATCTCTAGAGGTGGATTTGCTTTTCCTCACATTCTGAGATGGAAGCCGATGATGGCAGCCTTGCCATTCGGAACTGGGGCTTCTACGACACCGTCAAAGGCAGCCTAGGCCTGCAGCTCATGTCGTCCATGCCGCCTGACCGGGACACAAAGCCGCTGCTCCCGAGAGGTGCCTTGCTGCAGCAGCATGGACATCACAATGCCGCACACCAGCTCCACGCGCAGCAATCACAACATCATCGTGACTATGCTGGCGGCACATCCTGACCCGGACACAAAGCCGCCTGTAAAGAAGAGGTGGCAGGTTCGGCAGCCTAAGTCACTGAAGCCTAGGAAGCCTAAGAAGGCTGCTGTTCCACCAGAGAATGGGGCACTTAATGAGCATGCGCCCCGAAGGAGGGGACCTAAGAAGACTGTGGGGATGGTGATTAATGGTATTGAGTTGGACCTTGCTAACATACCGACACCAGTGTGCTCATGCACCGGAGCTCCCCAGCAATGCTACCGATGGGGCGCAGGTGGCTGGCAGTCTGCATGCTGCACAACTTCTATTTCAACGTATCCACTGCCAATGAGCACAAAGCGCCGGGGCGCTCGAATTGCTGGAAGGAAGATGAGCCAAGGTGCATTCAAAAAGGTGCTTGAGAAGCTTGCTGGCGAAGGGTACAACCTTGCTAATCCAATTGACTTGAAGACGTTTTGGGCTAAGCATGGCACAAATAAGTTTGTAACGATCAGGTAAAATGACATAGTATGTTTCTAGCTTTGTAGGTTGTAGAGCTGCAGTTAGGCCCGATTTATTGCTTTTATGTCTATGTAAGAATCTGCAGAAATTTGTAGTAGTAGTAGTAGCAGCAGCATGTAGCAATGTTTAGTTTTAAATGACTTAGTTGTAATGTCTATCTTGAGCTTCAGATATTGACCCGACTGAAGCCTGTTTGTATCCTTCACTTTGCAAATTGTAGTTTACCCTGTACCCATAATTGTCTCTAATTTAGGGCATGGAATTTAATGCATTAATTAAATCTGTGTGGAAGTAAGCACT
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